STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHH00313.1Carboxyl transferase domain protein; KEGG: bfs:BF3128 1.8e-241 mmdA; putative methylmalonyl-CoA decarboxylase, alpha-subunit; Psort location: Cytoplasmic, score: 9.97. (539 aa)    
Predicted Functional Partners:
EHG98972.1
acetyl-CoA carboxylase, biotin carboxylase subunit; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.
 
 0.984
EHH00316.1
Biotin-requiring enzyme; KEGG: bfr:BF3291 1.1e-33 biotin carboxyl carrier protein; K01606 methylmalonyl-CoA decarboxylase gamma chain; Psort location: Cytoplasmic, score: 9.97.
 
 0.958
EHH00630.1
KEGG: bvu:BVU_3787 0. pyruvate-flavodoxin oxidoreductase; K03737 putative pyruvate-flavodoxin oxidoreductase; Psort location: Cytoplasmic, score: 8.96.
  
 0.925
EHH01050.1
Putative glutaconyl-CoA decarboxylase subunit gamma.
 
 0.877
EHH00312.1
methylmalonyl-CoA epimerase; KEGG: bth:BT_1685 1.5e-54 lactoylglutathione lyase and related protein; K01759 lactoylglutathione lyase; Psort location: Cytoplasmic, score: 8.96.
 
 
 0.869
EHG98971.1
Biotin-requiring enzyme.
 
 0.867
EHG99489.1
KEGG: pmz:HMPREF0659_A5436 3.1e-63 biotin--[acetyl-CoA-carboxylase] ligase K03524; Psort location: Cytoplasmic, score: 9.26.
  
 
 0.855
EHG98870.1
Putative acetyl-CoA carboxylase, biotin carboxyl carrier protein.
  
 
 0.807
EHH00315.1
Hypothetical protein.
       0.709
EHH01168.1
2-oxoacid:acceptor oxidoreductase, alpha subunit; KEGG: bvu:BVU_0979 5.4e-288 2-oxoglutarate synthase subunit KorA; K00174 2-oxoglutarate ferredoxin oxidoreductase subunit alpha; Psort location: Cytoplasmic, score: 8.96.
  
 
 0.678
Your Current Organism:
Paraprevotella clara
NCBI taxonomy Id: 762968
Other names: P. clara YIT 11840, Paraprevotella clara YIT 11840, Paraprevotella clara str. YIT 11840, Paraprevotella clara strain YIT 11840
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