STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHH00319.1NAD dependent epimerase/dehydratase family protein; KEGG: nde:NIDE0025 3.6e-53 putative NADH-flavin reductase K07118. (219 aa)    
Predicted Functional Partners:
EHH00318.1
HTH-type transcriptional activator HxlR.
  
  
 0.688
EHH01419.1
Transcriptional regulator, TetR family; Psort location: Cytoplasmic, score: 8.96.
  
     0.468
EHG98715.1
Transcriptional regulator, AraC family; KEGG: lla:L0149 1.8e-10 adaA; methylphosphotriester-DNA alkyltransferase; K13530 AraC family transcriptional regulator, regulatory protein of adaptative response / methylphosphotriester-DNA alkyltransferase methyltransferase; Psort location: Cytoplasmic, score: 8.96.
  
     0.458
EHH01957.1
KEGG: apa:APP7_1949 1.8e-115 probable NADH-dependent butanol dehydrogenase 1; Psort location: Cytoplasmic, score: 9.97.
  
    0.435
EHH00620.1
Hypothetical protein; KEGG: bvu:BVU_0200 3.8e-05 putative alcohol dehydrogenase; K08325 NADP-dependent alcohol dehydrogenase.
  
    0.435
EHH01411.1
RecF/RecN/SMC protein; KEGG: fnu:FN0522 9.2e-07 exonuclease SBCC K03546; Psort location: Cytoplasmic, score: 8.96.
   
    0.433
EHG99645.1
Hypothetical protein; KEGG: str:Sterm_1564 6.1e-05 ABC transporter related protein; K09810 lipoprotein-releasing system ATP-binding protein; Psort location: Cytoplasmic, score: 8.96.
   
    0.433
EHG99693.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
   
    0.433
EHG98862.1
Hypothetical protein.
   
    0.433
EHG98670.1
Type I site-specific deoxyribonuclease, HsdR family; Subunit R is required for both nuclease and ATPase activities, but not for modification.
   
    0.400
Your Current Organism:
Paraprevotella clara
NCBI taxonomy Id: 762968
Other names: P. clara YIT 11840, Paraprevotella clara YIT 11840, Paraprevotella clara str. YIT 11840, Paraprevotella clara strain YIT 11840
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.