STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHH00335.1Iron-only hydrogenase maturation rSAM protein HydE; KEGG: bvu:BVU_0348 3.8e-97 biotin synthase K01012; Psort location: Cytoplasmic, score: 8.96. (382 aa)    
Predicted Functional Partners:
EHH00333.1
Hydrogenase maturation GTPase HydF; KEGG: bad:BAD_0815 1.8e-11 engA; bifunctional cytidylate kinase/GTP-binding protein K03977; Psort location: Cytoplasmic, score: 9.26.
   
 0.967
bioD
Dethiobiotin synthase; Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8- diaminopelargonic acid (DAPA) to form an ureido ring.
  
 
 0.891
EHH00336.1
4Fe-4S binding domain protein; KEGG: brm:Bmur_2631 3.0e-104 ferredoxin hydrogenase.
 
  
 0.878
EHH00334.1
Iron-only hydrogenase maturation rSAM protein HydG; KEGG: hor:Hore_19320 2.0e-107 thiH; thiamine biosynthesis protein ThiH K03150; Psort location: Cytoplasmic, score: 8.96.
 
  
0.841
bioA
Adenosylmethionine-8-amino-7-oxononanoate transaminase; Catalyzes the transfer of the alpha-amino group from S- adenosyl-L-methionine (SAM) to 7-keto-8-aminopelargonic acid (KAPA) to form 7,8-diaminopelargonic acid (DAPA). It is the only animotransferase known to utilize SAM as an amino donor; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. BioA subfamily.
  
  
 0.783
EHH01489.1
Thiazole biosynthesis protein ThiH.
 
  
 0.720
EHH00332.1
Hypothetical protein.
       0.641
EHH02079.1
KEGG: pru:PRU_2201 1.8e-152 argD; acetylornithine transaminase K00818; Psort location: Cytoplasmic, score: 9.97; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
   
 
 0.604
EHH01452.1
KEGG: bvu:BVU_2780 3.7e-122 8-amino-7-oxononanoate synthase K00652; Psort location: Cytoplasmic, score: 9.26.
  
 
 0.585
EHG98588.1
KEGG: bth:BT_0870 1.7e-188 8-amino-7-oxononanoate synthase; K00652 8-amino-7-oxononanoate synthase; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.585
Your Current Organism:
Paraprevotella clara
NCBI taxonomy Id: 762968
Other names: P. clara YIT 11840, Paraprevotella clara YIT 11840, Paraprevotella clara str. YIT 11840, Paraprevotella clara strain YIT 11840
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.