STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHH00387.1Transcriptional regulator, AraC family; KEGG: bli:BL05281 1.8e-09 adaA; methylphosphotriester-DNA alkyltransferase/transcriptional regulator; K13530 AraC family transcriptional regulator, regulatory protein of adaptative response / methylphosphotriester-DNA alkyltransferase methyltransferase; Psort location: Cytoplasmic, score: 9.26. (297 aa)    
Predicted Functional Partners:
EHG98933.1
Transcriptional regulator, AraC family.
  
 
 0.805
EHH00380.1
Tetratricopeptide repeat protein; KEGG: dsh:Dshi_1167 0.00081 peptidase M48 Ste24p; Psort location: Cytoplasmic, score: 8.96.
 
    0.793
EHH00681.1
Putative RNA polymerase sigma factor RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
    
 
 0.766
EHH01364.1
Malate dehydrogenase; KEGG: bth:BT_1969 0. malic enzyme K00029; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.721
EHH00630.1
KEGG: bvu:BVU_3787 0. pyruvate-flavodoxin oxidoreductase; K03737 putative pyruvate-flavodoxin oxidoreductase; Psort location: Cytoplasmic, score: 8.96.
  
  0.719
EHG99381.1
Transcriptional regulator, AraC family; KEGG: ppy:PPE_03410 2.4e-06 adenosine deaminase; Psort location: Cytoplasmic, score: 9.26.
  
   0.715
EHG99441.1
KEGG: bvu:BVU_2063 2.1e-112 prephenate dehydratase; K04518 prephenate dehydratase; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.714
EHH00864.1
KEGG: bur:Bcep18194_C7173 6.2e-11 two component AraC family transcriptional regulator K05971; Psort location: CytoplasmicMembrane, score: 10.00.
  
   0.690
EHH00555.1
KEGG: bvu:BVU_4007 0. glutamate synthase, large subunit; K00265 glutamate synthase (NADPH/NADH) large chain.
    
  0.685
EHH00386.1
Nitroreductase family protein; KEGG: gka:GK1652 2.2e-14 nitro/flavin reductase K00540; Psort location: Cytoplasmic, score: 8.96.
       0.664
Your Current Organism:
Paraprevotella clara
NCBI taxonomy Id: 762968
Other names: P. clara YIT 11840, Paraprevotella clara YIT 11840, Paraprevotella clara str. YIT 11840, Paraprevotella clara strain YIT 11840
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