STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHH00397.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.96. (293 aa)    
Predicted Functional Partners:
EHH00398.1
Hypothetical protein.
       0.709
EHH00396.1
KEGG: meh:M301_2252 1.5e-38 glycosyl transferase, WecB/TagA/CpsF family; Psort location: Cytoplasmic, score: 8.96; Belongs to the glycosyltransferase 26 family.
 
    0.699
EHH00394.1
Helicase protein; KEGG: gfo:GFO_1535 9.2e-29 res; helicase-like protein K01156; Psort location: Cytoplasmic, score: 9.97.
       0.651
EHH00395.1
Acyltransferase; KEGG: rop:ROP_52410 2.0e-08 putative acyltransferase; Psort location: CytoplasmicMembrane, score: 10.00.
       0.651
EHH00399.1
Glycosyltransferase, group 1 family protein; KEGG: npu:Npun_F5502 1.1e-42 glycosyl transferase, group 1; Psort location: Cytoplasmic, score: 9.97.
  
    0.517
EHH00393.1
KEGG: pdi:BDI_3392 0. formate acetyltransferase; K00656 formate C-acetyltransferase; Psort location: Cytoplasmic, score: 9.97.
       0.424
Your Current Organism:
Paraprevotella clara
NCBI taxonomy Id: 762968
Other names: P. clara YIT 11840, Paraprevotella clara YIT 11840, Paraprevotella clara str. YIT 11840, Paraprevotella clara strain YIT 11840
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.