STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHH00407.1Glycosyltransferase, group 2 family protein; KEGG: bce:BC5267 1.9e-38 glycosyltransferase K00754; Psort location: CytoplasmicMembrane, score: 7.88. (311 aa)    
Predicted Functional Partners:
EHH01581.1
CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase.
     0.903
EHH00408.1
Hypothetical protein; KEGG: efa:EF2489 1.1e-21 MurB family protein; K00075 UDP-N-acetylmuramate dehydrogenase; Psort location: Cytoplasmic, score: 8.96.
   
  0.798
EHH00406.1
Hypothetical protein; KEGG: lsl:LSL_0695 1.4e-33 rfaG; glycosyltransferase K00754; Psort location: Cytoplasmic, score: 8.96.
      0.787
EHH00405.1
Hypothetical protein; KEGG: baf:BAPKO_0268 0.0016 bacA; undecaprenyl pyrophosphate phosphatase K06153; Psort location: CytoplasmicMembrane, score: 10.00.
       0.773
EHH00409.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.82.
       0.773
EHG99203.1
Trehalose-phosphatase; KEGG: bvu:BVU_3259 8.8e-288 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; K00697 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Psort location: Cytoplasmic, score: 9.97.
  
 
 0.667
EHH00833.1
KEGG: fps:FP0293 2.9e-44 polysaccharide deacetylase; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.626
EHH01583.1
Glycosyltransferase, group 2 family protein; KEGG: cbi:CLJ_B2936 2.4e-31 putative glycosyltransferase; Psort location: CytoplasmicMembrane, score: 7.88.
0.590
EHH00411.1
MATE domain protein; KEGG: ecn:Ecaj_0810 0.0089 cytochrome-c oxidase K02274; Psort location: CytoplasmicMembrane, score: 10.00.
  
 
  0.562
EHG99394.1
Tetratricopeptide repeat protein; KEGG: ava:Ava_1552 7.3e-06 TPR repeat-containing serine/threonin protein kinase K00908.
  
 
 0.548
Your Current Organism:
Paraprevotella clara
NCBI taxonomy Id: 762968
Other names: P. clara YIT 11840, Paraprevotella clara YIT 11840, Paraprevotella clara str. YIT 11840, Paraprevotella clara strain YIT 11840
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