STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHH00583.1Fasciclin domain protein. (543 aa)    
Predicted Functional Partners:
EHH00581.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
 
    0.951
EHH00582.1
TonB-dependent receptor; Psort location: OuterMembrane, score: 9.52.
 
     0.939
EHH00584.1
SusD family protein.
 
     0.933
EHH00585.1
TonB-dependent receptor plug domain protein; Psort location: OuterMembrane, score: 9.49.
 
     0.927
EHH00587.1
Fasciclin domain protein; Psort location: Cytoplasmic, score: 8.96.
 
    0.910
nuoD
Respiratory-chain NADH dehydrogenase, subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; In the C-terminal section; belongs to the complex I 49 kDa subunit family.
    
   0.891
EHH00588.1
Fasciclin domain protein; Psort location: Cytoplasmic, score: 8.96.
 
    0.878
EHG99129.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
    0.794
EHH01236.1
Fasciclin domain protein.
 
    0.784
EHH01221.1
TonB-dependent receptor; KEGG: oih:OB2331 0.0062 bacillopeptidase F; K13276 bacillopeptidase F; Psort location: OuterMembrane, score: 9.52.
  
    0.780
Your Current Organism:
Paraprevotella clara
NCBI taxonomy Id: 762968
Other names: P. clara YIT 11840, Paraprevotella clara YIT 11840, Paraprevotella clara str. YIT 11840, Paraprevotella clara strain YIT 11840
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.