STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHH00618.1Carbon starvation protein CstA; Psort location: CytoplasmicMembrane, score: 10.00. (479 aa)    
Predicted Functional Partners:
EHH00616.1
Hypothetical protein.
       0.791
EHH00617.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.82.
       0.773
EHG98717.1
Transporter, SSS family; KEGG: apb:SAR116_0788 7.7e-06 Na+/solute symporter (Ssf family); Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
  
    0.758
EHH00010.1
AMP-binding enzyme; KEGG: pdi:BDI_2255 1.0e-261 acetyl-coenzyme A synthetase; K01895 acetyl-CoA synthetase; Psort location: Cytoplasmic, score: 9.97.
   
    0.722
EHH00619.1
Hypothetical protein; KEGG: eci:UTI89_C1705 1.2e-45 yddW; lipoprotein YddW precursor; Psort location: Periplasmic, score: 9.83.
       0.570
EHH00620.1
Hypothetical protein; KEGG: bvu:BVU_0200 3.8e-05 putative alcohol dehydrogenase; K08325 NADP-dependent alcohol dehydrogenase.
       0.542
EHH00621.1
KEGG: sds:SDEG_0457 8.0e-17 acetyltransferase GNAT family.
       0.542
EHG98398.1
KEGG: gfo:GFO_0006 2.5e-21 sugar-binding sensor histidine kinase/response regulator hybrid; Psort location: CytoplasmicMembrane, score: 7.88.
   
  
 0.432
Your Current Organism:
Paraprevotella clara
NCBI taxonomy Id: 762968
Other names: P. clara YIT 11840, Paraprevotella clara YIT 11840, Paraprevotella clara str. YIT 11840, Paraprevotella clara strain YIT 11840
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.