STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHH00620.1Hypothetical protein; KEGG: bvu:BVU_0200 3.8e-05 putative alcohol dehydrogenase; K08325 NADP-dependent alcohol dehydrogenase. (149 aa)    
Predicted Functional Partners:
EHH00621.1
KEGG: sds:SDEG_0457 8.0e-17 acetyltransferase GNAT family.
  
    0.778
guaA
GMP synthase domain protein; Catalyzes the synthesis of GMP from XMP.
  
    0.775
EHG98122.1
Hypothetical protein; KEGG: coc:Coch_1861 4.0e-31 guaA; GMP synthase; K01951 GMP synthase (glutamine-hydrolysing); Psort location: Cytoplasmic, score: 9.26.
  
    0.775
EHH00619.1
Hypothetical protein; KEGG: eci:UTI89_C1705 1.2e-45 yddW; lipoprotein YddW precursor; Psort location: Periplasmic, score: 9.83.
       0.746
EHH00616.1
Hypothetical protein.
       0.542
EHH00617.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.82.
       0.542
EHH00618.1
Carbon starvation protein CstA; Psort location: CytoplasmicMembrane, score: 10.00.
       0.542
EHH00410.1
Putative glyoxal reductase; KEGG: bmq:BMQ_1065 6.0e-51 2,5-diketo-D-gluconic acid reductase A; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.463
EHG98618.1
Organophosphate reductase; KEGG: coc:Coch_1297 1.8e-99 2,5-didehydrogluconate reductase; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.463
EHH00319.1
NAD dependent epimerase/dehydratase family protein; KEGG: nde:NIDE0025 3.6e-53 putative NADH-flavin reductase K07118.
  
    0.435
Your Current Organism:
Paraprevotella clara
NCBI taxonomy Id: 762968
Other names: P. clara YIT 11840, Paraprevotella clara YIT 11840, Paraprevotella clara str. YIT 11840, Paraprevotella clara strain YIT 11840
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.