STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHH00623.1Hypothetical protein; KEGG: ddd:Dda3937_04140 4.6e-21 integral membrane protein; Psort location: CytoplasmicMembrane, score: 10.00. (355 aa)    
Predicted Functional Partners:
EHH00622.1
KEGG: cpi:Cpin_1816 1.3e-174 glycoside hydrolase family 3 domain protein; K05349 beta-glucosidase; Belongs to the glycosyl hydrolase 3 family.
       0.588
EHH02056.1
Hypothetical protein.
  
    0.512
EHH00624.1
Acetyltransferase, GNAT family; KEGG: lsl:LSL_1772 1.2e-31 wecD; acetyltransferase K00680; Psort location: Cytoplasmic, score: 8.96.
       0.506
EHH00625.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.506
EHH00374.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.487
EHH01927.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.485
EHH00603.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.458
EHH00626.1
Glycosyl hydrolase, family 43; KEGG: cja:CJA_3018 6.8e-75 gly43N; beta-xylosidase/alpha-L-arabinfuranosidase, putative, gly43N; Belongs to the glycosyl hydrolase 43 family.
       0.450
EHG99955.1
KEGG: pmz:HMPREF0659_A6458 2.0e-75 glycosyltransferase, group 4 family; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
 0.436
EHH02052.1
KEGG: chu:CHU_0837 0.00076 hypothetical protein K01238; Psort location: Extracellular, score: 9.65.
  
     0.430
Your Current Organism:
Paraprevotella clara
NCBI taxonomy Id: 762968
Other names: P. clara YIT 11840, Paraprevotella clara YIT 11840, Paraprevotella clara str. YIT 11840, Paraprevotella clara strain YIT 11840
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.