STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHH00165.1RteC protein. (286 aa)    
Predicted Functional Partners:
EHH02043.1
RteC protein.
  
     0.667
EHH01413.1
RteC protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.660
EHG98624.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.632
EHH01346.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.555
EHG99702.1
Toprim domain protein; KEGG: pmz:HMPREF0659_A6095 0.0021 dnaG_2; DNA primase K02316; Psort location: Cytoplasmic, score: 8.96.
  
     0.551
EHH00164.1
KEGG: bld:BLi02836 1.8e-06 adaA; AdaA; K13530 AraC family transcriptional regulator, regulatory protein of adaptative response / methylphosphotriester-DNA alkyltransferase methyltransferase; Psort location: Cytoplasmic, score: 8.96.
       0.518
EHH01437.1
Site-specific recombinase, phage integrase family; KEGG: apb:SAR116_1915 0.0077 tyrosine recombinase XerD K04763; Psort location: Cytoplasmic, score: 8.96; Belongs to the 'phage' integrase family.
  
     0.487
EHH01347.1
KEGG: apb:SAR116_1748 0.00091 phage integrase family protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.480
EHG99703.1
Hypothetical protein.
 
     0.472
EHG99794.1
Hypothetical protein.
  
     0.458
Your Current Organism:
Paraprevotella clara
NCBI taxonomy Id: 762968
Other names: P. clara YIT 11840, Paraprevotella clara YIT 11840, Paraprevotella clara str. YIT 11840, Paraprevotella clara strain YIT 11840
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.