STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHG99983.1Tetratricopeptide repeat protein; KEGG: hha:Hhal_1093 0.0073 imidazole glycerol phosphate synthase, glutamine amidotransferase subunit; K02501 glutamine amidotransferase. (225 aa)    
Predicted Functional Partners:
EHG98375.1
Hypothetical protein; KEGG: bfa:Bfae_21680 0.0059 argininosuccinate synthase K01940.
  
     0.769
EHH00539.1
Hypothetical protein.
  
    0.761
ribH
6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin.
  
    0.755
EHH01794.1
Hypothetical protein.
  
     0.745
EHG99985.1
Hypothetical protein.
 
     0.728
EHH01918.1
Hypothetical protein; Psort location: OuterMembrane, score: 9.49.
  
   
 0.720
EHH01820.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.697
EHG99547.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.82.
  
     0.696
EHH00832.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.692
EHH00044.1
Hypothetical protein; KEGG: bse:Bsel_1765 0.00013 CheA signal transduction histidine kinase K03407.
  
    0.689
Your Current Organism:
Paraprevotella clara
NCBI taxonomy Id: 762968
Other names: P. clara YIT 11840, Paraprevotella clara YIT 11840, Paraprevotella clara str. YIT 11840, Paraprevotella clara strain YIT 11840
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.