STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHH00002.1Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.82. (177 aa)    
Predicted Functional Partners:
EHH00001.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.741
EHG99250.1
Competence/damage-inducible protein CinA domain protein; KEGG: cco:CCC13826_0279 1.2e-22 fadD; long-chain-fatty-acid--CoA ligase K03743; Psort location: Cytoplasmic, score: 8.96; Belongs to the CinA family.
    
  0.583
EHH00630.1
KEGG: bvu:BVU_3787 0. pyruvate-flavodoxin oxidoreductase; K03737 putative pyruvate-flavodoxin oxidoreductase; Psort location: Cytoplasmic, score: 8.96.
  
   0.574
EHG99999.1
Hypothetical protein; KEGG: bao:BAMF_3494 0.0044 bcrC; undecaprenyl pyrophosphate phosphatase, bacitracin resistance; Psort location: OuterMembrane, score: 9.49.
       0.526
guaA
GMP synthase domain protein; Catalyzes the synthesis of GMP from XMP.
    
  0.511
EHG98122.1
Hypothetical protein; KEGG: coc:Coch_1861 4.0e-31 guaA; GMP synthase; K01951 GMP synthase (glutamine-hydrolysing); Psort location: Cytoplasmic, score: 9.26.
    
  0.511
EHH01084.1
OmpA family protein.
  
  0.507
EHH00003.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.507
EHH00957.1
WD40-like protein.
   
  0.485
EHG99608.1
WD40-like protein; Psort location: Cytoplasmic, score: 8.96.
   
  0.485
Your Current Organism:
Paraprevotella clara
NCBI taxonomy Id: 762968
Other names: P. clara YIT 11840, Paraprevotella clara YIT 11840, Paraprevotella clara str. YIT 11840, Paraprevotella clara strain YIT 11840
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.