STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHH00012.1Hypothetical protein; KEGG: ere:EUBREC_2332 0.00067 2-isopropylmalate synthase; K01649 2-isopropylmalate synthase; Psort location: Cytoplasmic, score: 8.96. (291 aa)    
Predicted Functional Partners:
EHG99731.1
Transcriptional regulator, AraC family; KEGG: bcb:BCB4264_A3840 8.4e-06 adaA; Ada regulatory protein/6-O-methylguanine-DNA methyltransferase K13530; Psort location: Cytoplasmic, score: 9.97.
  
     0.736
EHG98966.1
Transcriptional regulator, AraC family.
  
     0.717
EHG98969.1
Transcriptional regulator, AraC family.
  
     0.645
EHG98705.1
Transcriptional regulator, AraC family; KEGG: lsp:Bsph_1999 4.0e-10 adaA; methylphosphotriester-DNA alkyltransferase K13530; Psort location: Cytoplasmic, score: 9.97.
  
     0.523
rpoA
DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
   0.513
EHH01364.1
Malate dehydrogenase; KEGG: bth:BT_1969 0. malic enzyme K00029; Psort location: Cytoplasmic, score: 9.97.
   
 
  0.508
mutS2
MutS2 family protein; Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity; Belongs to the DNA mismatch repair MutS family. MutS2 subfamily.
       0.479
Your Current Organism:
Paraprevotella clara
NCBI taxonomy Id: 762968
Other names: P. clara YIT 11840, Paraprevotella clara YIT 11840, Paraprevotella clara str. YIT 11840, Paraprevotella clara strain YIT 11840
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.