STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHH00033.1Potassium uptake protein, TrkH family; KEGG: apb:SAR116_1886 2.0e-68 cation transporter K03498; Psort location: CytoplasmicMembrane, score: 10.00. (504 aa)    
Predicted Functional Partners:
EHG98863.1
TrkA protein.
 
 
 0.962
EHG99833.1
TrkA protein; KEGG: sun:SUN_2183 8.9e-13 cation-transporting P-tyep ATPase; K01537 Ca2+-transporting ATPase; Psort location: CytoplasmicMembrane, score: 10.00.
  
 
 0.876
EHH00505.1
TrkA protein.
  
 
 0.865
EHH00520.1
Transporter, cation channel family protein.
  
 
 0.799
EHH00630.1
KEGG: bvu:BVU_3787 0. pyruvate-flavodoxin oxidoreductase; K03737 putative pyruvate-flavodoxin oxidoreductase; Psort location: Cytoplasmic, score: 8.96.
   
 
 0.766
EHH00034.1
KEGG: pdi:BDI_0475 4.3e-50 phosphinothricin N-acetyltransferase, putative; K03823 phosphinothricin acetyltransferase; Psort location: Cytoplasmic, score: 8.96.
       0.620
Your Current Organism:
Paraprevotella clara
NCBI taxonomy Id: 762968
Other names: P. clara YIT 11840, Paraprevotella clara YIT 11840, Paraprevotella clara str. YIT 11840, Paraprevotella clara strain YIT 11840
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.