STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHH00037.1RND transporter, HAE1 family; KEGG: rcp:RCAP_rcc00432 8.7e-162 mdtB; multidrug resistance protein MdtB; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1013 aa)    
Predicted Functional Partners:
EHH00038.1
Efflux transporter, RND family, MFP subunit; KEGG: rcp:RCAP_rcc02894 1.1e-14 mdtE; multidrug resistance protein MdtE K03585; Psort location: CytoplasmicMembrane, score: 7.88; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  0.977
EHH00036.1
Psort location: OuterMembrane, score: 9.93.
  0.960
EHG98930.1
Efflux transporter, RND family, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
  0.875
EHH00517.1
Efflux transporter, RND family, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  0.839
EHH00022.1
Efflux transporter, RND family, MFP subunit; Psort location: CytoplasmicMembrane, score: 9.82; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
  0.830
EHG99382.1
Efflux transporter, RND family, MFP subunit; KEGG: rcp:RCAP_rcc02894 6.4e-21 mdtE; multidrug resistance protein MdtE K03585; Psort location: CytoplasmicMembrane, score: 9.82; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  0.796
EHG99384.1
Efflux transporter, outer membrane factor lipoprotein, NodT family; KEGG: ddd:Dda3937_01226 1.8e-35 outer membrane protein.
 
  0.791
EHH00088.1
Efflux transporter, RND family, MFP subunit; KEGG: apb:SAR116_2008 5.4e-07 secretion protein HlyD; Psort location: CytoplasmicMembrane, score: 9.99; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
  0.775
EHH00848.1
Efflux transporter, RND family, MFP subunit; Psort location: Cytoplasmic, score: 8.96; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
  0.671
EHH01769.1
Efflux transporter, RND family, MFP subunit; KEGG: apb:SAR116_2008 2.0e-07 secretion protein HlyD.
  
  0.641
Your Current Organism:
Paraprevotella clara
NCBI taxonomy Id: 762968
Other names: P. clara YIT 11840, Paraprevotella clara YIT 11840, Paraprevotella clara str. YIT 11840, Paraprevotella clara strain YIT 11840
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