STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHH00058.1Transporter, major facilitator family protein; KEGG: bmq:BMQ_0779 0.00015 narK; nitrite extrusion protein K02575; Psort location: CytoplasmicMembrane, score: 10.00. (456 aa)    
Predicted Functional Partners:
EHH00059.1
KEGG: pmz:HMPREF0659_A6994 7.7e-241 peptidase, S9A/B/C family, catalytic domain protein.
 
     0.824
EHG98213.1
Hypothetical protein; KEGG: fps:FP2468 5.9e-09 paaE; phenylacetic acid degradation NADH oxidoreductase PaaE K02613.
     
 0.809
EHH00015.1
KEGG: sub:SUB0808 1.8e-186 pyridine nucleotide-disulphide oxidoreductase family protein; Psort location: Cytoplasmic, score: 9.97; Belongs to the sulfur carrier protein TusA family.
  
 
 0.652
EHG98995.1
Peptidase, C69 family; KEGG: ddd:Dda3937_03172 1.9e-38 dipeptidase-related protein.
  
     0.647
pyrG
CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates.
       0.639
yidC
Membrane protein insertase, YidC/Oxa1 family domain protein; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins.
       0.627
EHG98856.1
Amino acid/peptide transporter.
  
  
 0.610
EHH01051.1
Hypothetical protein.
 
     0.606
EHG98839.1
KEGG: bth:BT_1806 2.9e-257 acyl-CoA dehydrogenase; K00257; Psort location: Cytoplasmic, score: 9.97.
 
  
 0.594
EHG99058.1
Putative dihydroorotate oxidase, electron transfer subunit.
     
 0.584
Your Current Organism:
Paraprevotella clara
NCBI taxonomy Id: 762968
Other names: P. clara YIT 11840, Paraprevotella clara YIT 11840, Paraprevotella clara str. YIT 11840, Paraprevotella clara strain YIT 11840
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.