STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHH00115.1Hypothetical protein. (981 aa)    
Predicted Functional Partners:
EHH00093.1
Glycosyl hydrolase family 10.
     0.811
EHH00852.1
FG-GAP repeat protein; KEGG: npu:Npun_F4869 3.7e-07 putative outer membrane adhesin like proteiin.
 
 0.809
EHH00129.1
Glycosyl hydrolase family 2, sugar binding domain protein; KEGG: cob:COB47_0714 2.5e-141 hypothetical protein; K05970 sialate O-acetylesterase; Belongs to the glycosyl hydrolase 2 family.
 
 
  0.809
EHH00095.1
Alpha-glucuronidase.
     0.803
EHG99138.1
Glycosyl hydrolase, family 43; KEGG: fba:FIC_01738 4.4e-119 beta-xylosidase; Belongs to the glycosyl hydrolase 43 family.
  
  0.781
EHH00120.1
Glycosyl hydrolase, family 43; KEGG: fsu:Fisuc_1769 1.4e-102 xylan 1,4-beta-xylosidase; Belongs to the glycosyl hydrolase 43 family.
 
  
  0.748
EHH01208.1
Glycosyl hydrolase family 2, sugar binding domain protein; KEGG: bvu:BVU_0738 4.2e-217 sialic acid-specific 9-O-acetylesterase; K05970 sialate O-acetylesterase; Psort location: Periplasmic, score: 9.83; Belongs to the glycosyl hydrolase 2 family.
 
 
  0.740
EHG98836.1
GDSL-like protein; KEGG: aca:ACP_0560 3.2e-45 rha1; rhamnogalacturonan acetylesterase; Psort location: Cytoplasmic, score: 8.96.
  
 
  0.672
EHH00116.1
Putative esterase; KEGG: eci:UTI89_C4270 1.1e-33 yieL; putative xylanase K07214; Psort location: Cytoplasmic, score: 8.96.
 
  
  0.669
EHH00507.1
Glycosyl hydrolase, family 43.
  
  
  0.644
Your Current Organism:
Paraprevotella clara
NCBI taxonomy Id: 762968
Other names: P. clara YIT 11840, Paraprevotella clara YIT 11840, Paraprevotella clara str. YIT 11840, Paraprevotella clara strain YIT 11840
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.