STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHH00117.1Glycosyl hydrolase, family 43; KEGG: cja:CJA_3018 8.7e-75 gly43N; beta-xylosidase/alpha-L-arabinfuranosidase, putative, gly43N; Belongs to the glycosyl hydrolase 43 family. (350 aa)    
Predicted Functional Partners:
EHG99603.1
Glycosyl hydrolase family 32; KEGG: bpb:bpr_I1784 6.6e-29 xsa43I; xylosidase/arabinofuranosidase Xsa43I; Belongs to the glycosyl hydrolase 43 family.
 
     0.907
EHH00627.1
Hypothetical protein; KEGG: bpb:bpr_I1784 2.4e-17 xsa43I; xylosidase/arabinofuranosidase Xsa43I; Psort location: Cytoplasmic, score: 8.96; Belongs to the glycosyl hydrolase 43 family.
 
  
  0.855
EHH00120.1
Glycosyl hydrolase, family 43; KEGG: fsu:Fisuc_1769 1.4e-102 xylan 1,4-beta-xylosidase; Belongs to the glycosyl hydrolase 43 family.
     0.799
EHH00119.1
Glycosyl hydrolase, family 43; KEGG: scl:sce4598 7.2e-135 xynD; endo-1,4-beta-xylanase; Belongs to the glycosyl hydrolase 43 family.
 
    
0.764
EHH00118.1
Carbohydrate binding module; KEGG: scl:sce4598 3.9e-111 xynD; endo-1,4-beta-xylanase; Belongs to the glycosyl hydrolase 43 family.
 
    
0.757
EHG98243.1
Hypothetical protein; KEGG: bpb:bpr_I1784 3.5e-20 xsa43I; xylosidase/arabinofuranosidase Xsa43I.
 
     0.715
EHH00116.1
Putative esterase; KEGG: eci:UTI89_C4270 1.1e-33 yieL; putative xylanase K07214; Psort location: Cytoplasmic, score: 8.96.
   
  0.679
EHG99459.1
Hypothetical protein; KEGG: bde:BDP_0236 4.4e-87 beta-xylosidase or endo-arabinase.
  
     0.657
EHH00127.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
     0.642
EHH00573.1
Hypothetical protein.
 
     0.631
Your Current Organism:
Paraprevotella clara
NCBI taxonomy Id: 762968
Other names: P. clara YIT 11840, Paraprevotella clara YIT 11840, Paraprevotella clara str. YIT 11840, Paraprevotella clara strain YIT 11840
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.