STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHH00144.1Hypothetical protein. (58 aa)    
Predicted Functional Partners:
EHH00145.1
Hypothetical protein.
       0.572
EHG99970.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.547
EHG99971.1
Sporulation and cell division repeat protein; Psort location: Cytoplasmic, score: 8.96.
       0.547
EHG99972.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.490
EHG99973.1
Glycosyltransferase, group 2 family protein; KEGG: vfi:VF_A0478 7.7e-35 N-acetylglucosaminyltransferase K00754; Psort location: CytoplasmicMembrane, score: 10.00.
       0.490
EHG99974.1
Nucleotide sugar dehydrogenase; KEGG: pdi:BDI_2219 8.0e-136 putative UDP-glucose-6 dehydrogenase; K02474 UDP-N-acetyl-D-galactosamine dehydrogenase; Psort location: Cytoplasmic, score: 9.97; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
       0.490
EHG99975.1
KEGG: chu:CHU_3259 0.0027 hypothetical protein K01238.
       0.467
EHH00141.1
KEGG: apb:SAR116_1094 2.3e-17 chromate transporter K07240; Psort location: CytoplasmicMembrane, score: 10.00.
       0.460
EHH00142.1
KEGG: apb:SAR116_1094 3.0e-11 chromate transporter K07240; Psort location: CytoplasmicMembrane, score: 10.00.
       0.460
EHH00143.1
Membrane protein, MarC family; KEGG: sbc:SbBS512_E3890 8.4e-22 putative dITP- and XTP- hydrolase; Psort location: CytoplasmicMembrane, score: 10.00.
       0.460
Your Current Organism:
Paraprevotella clara
NCBI taxonomy Id: 762968
Other names: P. clara YIT 11840, Paraprevotella clara YIT 11840, Paraprevotella clara str. YIT 11840, Paraprevotella clara strain YIT 11840
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.