STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHG99911.1Hypothetical protein. (587 aa)    
Predicted Functional Partners:
EHG99910.1
Hypothetical protein.
  
    0.794
EHG99912.1
Hypothetical protein.
  
    0.777
EHG99913.1
Hypothetical protein.
  
    0.746
EHG99914.1
KEGG: sfu:Sfum_2744 4.1e-09 TonB-dependent receptor; K01802 peptidylprolyl isomerase; Psort location: OuterMembrane, score: 9.92.
  
    0.738
EHH01545.1
Hypothetical protein; KEGG: tva:TVAG_387410 2.9e-23 viral A-type inclusion protein; K02331 DNA polymerase phi subunit; overlaps another CDS with the same product name.
    
   0.554
EHG99652.1
Hypothetical protein; KEGG: phu:Phum_PHUM098460 3.4e-11 myosin-9, putative K10352.
    
   0.554
EHG98504.1
Tape measure domain protein; KEGG: edi:EDI_341030 1.4e-17 intracellular protein transport protein USO1; Psort location: OuterMembrane, score: 9.77.
    
   0.554
EHH01015.1
Hypothetical protein.
    
   0.538
EHG98794.1
Carbohydrate binding module.
    
 0.531
EHH01888.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
     
 0.519
Your Current Organism:
Paraprevotella clara
NCBI taxonomy Id: 762968
Other names: P. clara YIT 11840, Paraprevotella clara YIT 11840, Paraprevotella clara str. YIT 11840, Paraprevotella clara strain YIT 11840
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.