STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHG99842.1Hypothetical protein. (52 aa)    
Predicted Functional Partners:
EHG99843.1
Helicase protein; KEGG: pru:PRU_2890 1.5e-267 putative type I restriction-modification system, R subunit; K01153 type I restriction enzyme, R subunit; Psort location: Cytoplasmic, score: 8.96.
       0.773
EHG99840.1
N-6 DNA Methylase; KEGG: pru:PRU_2887 4.0e-141 type I restriction-modification system subunit M; K03427 type I restriction enzyme M protein; Psort location: Cytoplasmic, score: 8.96.
       0.737
EHG99841.1
KEGG: mar:MAE_56980 2.2e-22 restriction modification system DNA specificity subunit; K01154 type I restriction enzyme, S subunit; Psort location: Cytoplasmic, score: 8.96.
       0.737
EHG99839.1
Hypothetical protein.
       0.503
Your Current Organism:
Paraprevotella clara
NCBI taxonomy Id: 762968
Other names: P. clara YIT 11840, Paraprevotella clara YIT 11840, Paraprevotella clara str. YIT 11840, Paraprevotella clara strain YIT 11840
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.