STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHG99865.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.96. (257 aa)    
Predicted Functional Partners:
EHG99866.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.778
EHG99864.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.723
EHG99863.1
Hypothetical protein.
       0.698
EHG99861.1
Hypothetical protein; KEGG: csh:Closa_2363 0.00063 ATP-dependent protease La; Psort location: CytoplasmicMembrane, score: 7.88.
       0.596
EHG99862.1
ABC transporter, ATP-binding protein; KEGG: ava:Ava_4383 2.3e-106 bacteriocin-processing peptidase K06147; Psort location: CytoplasmicMembrane, score: 10.00.
       0.596
EHG99859.1
Hypothetical protein; Psort location: Extracellular, score: 9.64.
       0.530
EHG99860.1
Hypothetical protein; KEGG: gfo:GFO_0918 1.4e-08 ereB; erythromycin esterase type II K01066; Psort location: Cytoplasmic, score: 8.96.
       0.530
EHG99857.1
Hypothetical protein.
       0.422
EHG99858.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.422
Your Current Organism:
Paraprevotella clara
NCBI taxonomy Id: 762968
Other names: P. clara YIT 11840, Paraprevotella clara YIT 11840, Paraprevotella clara str. YIT 11840, Paraprevotella clara strain YIT 11840
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.