STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHG99876.1ComEC/Rec2-like protein; KEGG: apb:SAR116_0501 6.2e-15 possible DNA uptake protein, ComEC K02238; Psort location: CytoplasmicMembrane, score: 10.00. (643 aa)    
Predicted Functional Partners:
EHH01898.1
DNA protecting protein DprA; KEGG: hip:CGSHiEE_07040 2.2e-37 2-isopropylmalate synthase K04096; Psort location: Cytoplasmic, score: 8.96.
 
  
 0.873
EHH01302.1
comF family protein; KEGG: chu:CHU_3495 8.1e-24 purF; amidophosphoribosyltransferase K00764; Psort location: Cytoplasmic, score: 9.97.
 
  
 0.857
EHH01331.1
Mg chelatase-like protein; KEGG: chu:CHU_0354 9.8e-170 ch1I; magnesium chelatase, subunit ChlI K07391; Psort location: Cytoplasmic, score: 9.97.
 
  
 0.816
EHG99877.1
DHH family protein; KEGG: bmd:BMD_4768 4.2e-09 nrnA; oligoribonuclease K06881; Psort location: Cytoplasmic, score: 8.96.
  
    0.650
EHH00322.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: gfo:GFO_3052 3.6e-85 two-component system sensor histidine kinase/response regulator hybrid K00936; Psort location: CytoplasmicMembrane, score: 7.88.
  
    0.649
EHG99488.1
Hypothetical protein; KEGG: sen:SACE_6045 1.2e-15 endonuclease K07460; Psort location: Cytoplasmic, score: 8.96; Belongs to the UPF0102 family.
  
    0.620
EHG99878.1
Hypothetical protein.
       0.574
EHG99250.1
Competence/damage-inducible protein CinA domain protein; KEGG: cco:CCC13826_0279 1.2e-22 fadD; long-chain-fatty-acid--CoA ligase K03743; Psort location: Cytoplasmic, score: 8.96; Belongs to the CinA family.
     
 0.498
EHG99875.1
KEGG: bvu:BVU_0050 3.9e-79 ribulose-phosphate 3-epimerase; K01783 ribulose-phosphate 3-epimerase; Psort location: Cytoplasmic, score: 9.97.
       0.475
EHH00641.1
KEGG: bvu:BVU_2071 1.2e-258 putative single-stranded-DNA-specific exonuclease; K07462 single-stranded-DNA-specific exonuclease; Psort location: Cytoplasmic, score: 9.97.
 
   
 0.457
Your Current Organism:
Paraprevotella clara
NCBI taxonomy Id: 762968
Other names: P. clara YIT 11840, Paraprevotella clara YIT 11840, Paraprevotella clara str. YIT 11840, Paraprevotella clara strain YIT 11840
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.