STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHG99626.1Conjugative transposon TraN protein. (311 aa)    
Predicted Functional Partners:
EHG99627.1
Conjugative transposon TraM protein.
 
     0.927
EHG99629.1
Conjugative transposon TraK protein.
 
   
 0.925
EHG99630.1
Conjugative transposon TraJ protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.921
EHG99631.1
Conjugative transposon protein TraI.
 
     0.912
EHG99634.1
Conjugative transposon protein TraF; Psort location: CytoplasmicMembrane, score: 9.82.
 
     0.911
EHG99635.1
Conjugative transposon protein TraE; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.907
EHG99633.1
Conjugation system ATPase, TraG family; Psort location: Cytoplasmic, score: 9.12.
 
   
 0.898
EHG99638.1
Hypothetical protein; KEGG: lbi:LEPBI_II0025 0.0011 putative ATPase, ParA family K03496; Psort location: Cytoplasmic, score: 8.96.
 
     0.823
EHG99642.1
Relaxase/mobilization nuclease domain protein; KEGG: tin:Tint_2201 7.9e-14 DNA topoisomerase; Psort location: Cytoplasmic, score: 8.96.
 
   0.797
EHG99625.1
Hypothetical protein.
       0.782
Your Current Organism:
Paraprevotella clara
NCBI taxonomy Id: 762968
Other names: P. clara YIT 11840, Paraprevotella clara YIT 11840, Paraprevotella clara str. YIT 11840, Paraprevotella clara strain YIT 11840
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.