STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHG99701.1Hypothetical protein. (92 aa)    
Predicted Functional Partners:
EHG99703.1
Hypothetical protein.
 
     0.941
EHG99702.1
Toprim domain protein; KEGG: pmz:HMPREF0659_A6095 0.0021 dnaG_2; DNA primase K02316; Psort location: Cytoplasmic, score: 8.96.
 
     0.830
EHH01402.1
Conjugative transposon protein TraA family protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.766
EHH02035.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.764
EHH01430.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.764
EHH00210.1
Conjugative transposon protein TraA family protein; KEGG: cti:RALTA_A3101 0.0085 parA1; chromosome partitioning ATPase ParA K03496; Psort location: Cytoplasmic, score: 8.96.
  
     0.760
EHG99704.1
RteC protein; KEGG: smf:Smon_0593 0.00063 putative CheA signal transduction histidine kinase; K03407 two-component system, chemotaxis family, sensor kinase CheA; Psort location: Cytoplasmic, score: 8.96.
 
     0.747
EHG99638.1
Hypothetical protein; KEGG: lbi:LEPBI_II0025 0.0011 putative ATPase, ParA family K03496; Psort location: Cytoplasmic, score: 8.96.
  
     0.743
EHH00630.1
KEGG: bvu:BVU_3787 0. pyruvate-flavodoxin oxidoreductase; K03737 putative pyruvate-flavodoxin oxidoreductase; Psort location: Cytoplasmic, score: 8.96.
     
 0.739
EHH00555.1
KEGG: bvu:BVU_4007 0. glutamate synthase, large subunit; K00265 glutamate synthase (NADPH/NADH) large chain.
    
  0.722
Your Current Organism:
Paraprevotella clara
NCBI taxonomy Id: 762968
Other names: P. clara YIT 11840, Paraprevotella clara YIT 11840, Paraprevotella clara str. YIT 11840, Paraprevotella clara strain YIT 11840
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.