STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHG99729.1CotH protein; Psort location: Cytoplasmic, score: 8.96. (490 aa)    
Predicted Functional Partners:
guaA
GMP synthase domain protein; Catalyzes the synthesis of GMP from XMP.
    
  0.843
EHG99728.1
Nucleotidyl transferase; KEGG: bth:BT_1633 1.5e-61 mannose-1-phosphate guanyltransferase; K00966 mannose-1-phosphate guanylyltransferase; Psort location: Cytoplasmic, score: 9.97.
       0.737
EHH01707.1
OmpA family protein.
  
     0.562
EHG99285.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.557
EHG99608.1
WD40-like protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.502
EHG99726.1
Hypothetical protein.
 
     0.493
EHH00750.1
Alpha amylase, catalytic domain protein; KEGG: pha:PSHAa1355 1.1e-129 glycosidase K01234; Psort location: Cytoplasmic, score: 9.97.
     
 0.486
EHH00485.1
Hypothetical protein.
  
     0.483
EHH01107.1
Hypothetical protein.
  
     0.452
EHG99132.1
Fasciclin domain protein.
  
     0.431
Your Current Organism:
Paraprevotella clara
NCBI taxonomy Id: 762968
Other names: P. clara YIT 11840, Paraprevotella clara YIT 11840, Paraprevotella clara str. YIT 11840, Paraprevotella clara strain YIT 11840
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.