STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHG99732.1Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00. (197 aa)    
Predicted Functional Partners:
EHG99733.1
Putative dihydrolipoyl dehydrogenase; KEGG: eci:UTI89_C0327 2.9e-115 ykgC; pyridine nucleotide-disulfide oxidoreductase; Psort location: Cytoplasmic, score: 9.97.
 
  
 0.894
EHG99731.1
Transcriptional regulator, AraC family; KEGG: bcb:BCB4264_A3840 8.4e-06 adaA; Ada regulatory protein/6-O-methylguanine-DNA methyltransferase K13530; Psort location: Cytoplasmic, score: 9.97.
 
     0.788
EHG99627.1
Conjugative transposon TraM protein.
  
     0.544
EHG99730.1
Thioredoxin; KEGG: mct:MCR_1740 1.4e-19 trx; thioredoxin K03671.
       0.452
EHG99833.1
TrkA protein; KEGG: sun:SUN_2183 8.9e-13 cation-transporting P-tyep ATPase; K01537 Ca2+-transporting ATPase; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.414
Your Current Organism:
Paraprevotella clara
NCBI taxonomy Id: 762968
Other names: P. clara YIT 11840, Paraprevotella clara YIT 11840, Paraprevotella clara str. YIT 11840, Paraprevotella clara strain YIT 11840
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.