STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHG99734.1Phosphotransferase enzyme family protein; KEGG: apb:SAR116_1265 6.0e-14 predicted P-loop-containing kinase K06958; Psort location: Cytoplasmic, score: 8.96. (514 aa)    
Predicted Functional Partners:
EHG99728.1
Nucleotidyl transferase; KEGG: bth:BT_1633 1.5e-61 mannose-1-phosphate guanyltransferase; K00966 mannose-1-phosphate guanylyltransferase; Psort location: Cytoplasmic, score: 9.97.
 
 0.979
EHG99223.1
S1 RNA binding domain protein; KEGG: bvu:BVU_4103 2.1e-231 ribonuclease G; K08301 ribonuclease G; Psort location: Cytoplasmic, score: 9.97.
 
 
 
 0.841
EHG98381.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
 
 0.799
EHG99735.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.785
EHG99736.1
KEGG: llk:LLKF_0891 4.0e-22 yijD; ABC transporter ATP-binding protein K02003; Psort location: CytoplasmicMembrane, score: 7.88.
       0.777
EHG99737.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.773
EHG99739.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
 
     0.709
EHG99738.1
RNA methyltransferase, RsmE family; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit.
       0.701
EHG99740.1
Nucleoside permease NupG; KEGG: eci:UTI89_C3355 2.3e-97 nupG; transport of nucleosides, permease protein K03289; Psort location: CytoplasmicMembrane, score: 10.00.
       0.668
EHG99907.1
Hypothetical protein; KEGG: snc:HMPREF0837_11342 0.00044 iga; IgA-specific metalloendopeptidase; Psort location: OuterMembrane, score: 9.52.
    
  0.652
Your Current Organism:
Paraprevotella clara
NCBI taxonomy Id: 762968
Other names: P. clara YIT 11840, Paraprevotella clara YIT 11840, Paraprevotella clara str. YIT 11840, Paraprevotella clara strain YIT 11840
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.