STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHG99744.1Putative 23S rRNA m5C1962 methyltransferase; KEGG: azo:azo0598 5.3e-68 SAM dependent methyl transferase K06969; Psort location: Cytoplasmic, score: 9.97. (399 aa)    
Predicted Functional Partners:
EHG99745.1
3'-5' exonuclease; KEGG: pmz:HMPREF0659_A6957 4.7e-60 3'-5' exonuclease; Psort location: Cytoplasmic, score: 8.96.
       0.820
EHG99746.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.762
EHH00825.1
THUMP domain protein; KEGG: fba:FIC_01642 4.2e-82 methyltransferase K07444; Psort location: Cytoplasmic, score: 9.97; Belongs to the methyltransferase superfamily.
 
  
 0.671
EHG99747.1
FtsK/SpoIIIE family protein; KEGG: reh:H16_A1582 1.9e-94 DNA segregation ATPase FtsK/SpoIIIE related protein K03466; Psort location: CytoplasmicMembrane, score: 10.00.
       0.607
EHG99748.1
Hypothetical protein.
       0.550
dut
dUTP diphosphatase; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA; Belongs to the dUTPase family.
    
  0.511
EHG99269.1
Protein FolC; KEGG: bvu:BVU_2328 2.9e-147 putative folylpolyglutamate synthase; K11754 dihydrofolate synthase; Belongs to the folylpolyglutamate synthase family.
   
 
  0.490
guaB
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
 
    0.489
EHG99742.1
Hypothetical protein.
       0.483
EHG99743.1
Hypothetical protein.
       0.483
Your Current Organism:
Paraprevotella clara
NCBI taxonomy Id: 762968
Other names: P. clara YIT 11840, Paraprevotella clara YIT 11840, Paraprevotella clara str. YIT 11840, Paraprevotella clara strain YIT 11840
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.