STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHG99746.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.96. (184 aa)    
Predicted Functional Partners:
EHG99744.1
Putative 23S rRNA m5C1962 methyltransferase; KEGG: azo:azo0598 5.3e-68 SAM dependent methyl transferase K06969; Psort location: Cytoplasmic, score: 9.97.
       0.762
EHG99745.1
3'-5' exonuclease; KEGG: pmz:HMPREF0659_A6957 4.7e-60 3'-5' exonuclease; Psort location: Cytoplasmic, score: 8.96.
       0.762
EHG99747.1
FtsK/SpoIIIE family protein; KEGG: reh:H16_A1582 1.9e-94 DNA segregation ATPase FtsK/SpoIIIE related protein K03466; Psort location: CytoplasmicMembrane, score: 10.00.
  
    0.573
EHG99748.1
Hypothetical protein.
       0.524
EHG99742.1
Hypothetical protein.
       0.466
EHG99743.1
Hypothetical protein.
       0.466
EHG99749.1
KEGG: bth:BT_4336 2.4e-136 thioredoxin reductase; K00384 thioredoxin reductase (NADPH); Psort location: Cytoplasmic, score: 9.97.
       0.423
Your Current Organism:
Paraprevotella clara
NCBI taxonomy Id: 762968
Other names: P. clara YIT 11840, Paraprevotella clara YIT 11840, Paraprevotella clara str. YIT 11840, Paraprevotella clara strain YIT 11840
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.