STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHG99763.1Glycosyl hydrolase, family 43; KEGG: cpi:Cpin_4501 6.3e-120 alpha-N-arabinofuranosidase; Belongs to the glycosyl hydrolase 43 family. (329 aa)    
Predicted Functional Partners:
EHG99603.1
Glycosyl hydrolase family 32; KEGG: bpb:bpr_I1784 6.6e-29 xsa43I; xylosidase/arabinofuranosidase Xsa43I; Belongs to the glycosyl hydrolase 43 family.
 
      0.697
EHH00120.1
Glycosyl hydrolase, family 43; KEGG: fsu:Fisuc_1769 1.4e-102 xylan 1,4-beta-xylosidase; Belongs to the glycosyl hydrolase 43 family.
 
     0.647
EHG99764.1
Glycosyl hydrolase, family 43; KEGG: cpi:Cpin_4501 4.3e-121 alpha-N-arabinofuranosidase; Belongs to the glycosyl hydrolase 43 family.
 
    
0.584
EHG98243.1
Hypothetical protein; KEGG: bpb:bpr_I1784 3.5e-20 xsa43I; xylosidase/arabinofuranosidase Xsa43I.
 
      0.583
EHG99136.1
Glycosyl hydrolase, family 43; KEGG: scl:sce4598 2.8e-101 xynD; endo-1,4-beta-xylanase; Belongs to the glycosyl hydrolase 43 family.
  
  
 
0.504
EHH00093.1
Glycosyl hydrolase family 10.
  
  0.472
EHG99765.1
Hypothetical protein.
       0.439
EHG99766.1
Exonuclease; KEGG: bth:BT_1431 2.5e-61 putative DNA polymerase III epsilon chain; K02342 DNA polymerase III subunit epsilon; Psort location: Cytoplasmic, score: 8.96.
       0.439
EHH00132.1
Glycosyl hydrolase, family 43; KEGG: dth:DICTH_1791 1.2e-82 endo-1,4-beta-xylanase D.
  
  
 
0.412
Your Current Organism:
Paraprevotella clara
NCBI taxonomy Id: 762968
Other names: P. clara YIT 11840, Paraprevotella clara YIT 11840, Paraprevotella clara str. YIT 11840, Paraprevotella clara strain YIT 11840
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