STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHG99766.1Exonuclease; KEGG: bth:BT_1431 2.5e-61 putative DNA polymerase III epsilon chain; K02342 DNA polymerase III subunit epsilon; Psort location: Cytoplasmic, score: 8.96. (182 aa)    
Predicted Functional Partners:
EHG99389.1
DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]
  
 0.966
EHG99482.1
KEGG: bvu:BVU_1885 0. DNA polymerase III alpha subunit; K02337 DNA polymerase III subunit alpha; Psort location: Cytoplasmic, score: 9.97.
   
 0.964
dnaX
DNA polymerase III, subunit gamma and tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.
   
 0.951
EHG99523.1
KEGG: bth:BT_3820 2.3e-113 putative DNA polymerase III, delta subunit; K02341 DNA polymerase III subunit delta'; Psort location: Cytoplasmic, score: 9.97.
   
 0.951
EHG99055.1
DNA polymerase III, delta subunit.
  
 
 0.880
EHG98741.1
Hypothetical protein; KEGG: coc:Coch_0460 2.4e-33 DNA polymerase III, delta subunit; K02340 DNA polymerase III subunit delta.
    
 0.864
EHG99765.1
Hypothetical protein.
       0.773
polA
DNA-directed DNA polymerase; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
  
 0.661
EHH01367.1
KEGG: phe:Phep_1011 3.8e-104 DEAD/DEAH box helicase domain protein; K05591 ATP-independent RNA helicase DbpA; Psort location: Cytoplasmic, score: 9.97.
  
 0.592
EHG99764.1
Glycosyl hydrolase, family 43; KEGG: cpi:Cpin_4501 4.3e-121 alpha-N-arabinofuranosidase; Belongs to the glycosyl hydrolase 43 family.
       0.572
Your Current Organism:
Paraprevotella clara
NCBI taxonomy Id: 762968
Other names: P. clara YIT 11840, Paraprevotella clara YIT 11840, Paraprevotella clara str. YIT 11840, Paraprevotella clara strain YIT 11840
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