STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHG99768.1KEGG: bfr:BF2156 1.4e-76 ABC transporter ATP-binding protein; K09810 lipoprotein-releasing system ATP-binding protein; Psort location: CytoplasmicMembrane, score: 10.00. (232 aa)    
Predicted Functional Partners:
EHG99769.1
KEGG: pen:PSEEN3665 0.00060 efflux ABC transporter, ATP-binding/permease protein K05685; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.999
EHG99771.1
KEGG: pen:PSEEN3665 0.00013 efflux ABC transporter, ATP-binding/permease protein K05685; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.999
EHH00671.1
Efflux ABC transporter, permease protein.
 
  0.988
EHG99767.1
KEGG: ppu:PP_4210 6.3e-05 efflux ABC transporter ATP-binding protein; K05685 macrolide transport system ATP-binding/permease protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
  0.973
EHG99772.1
Efflux transporter, RND family, MFP subunit; KEGG: apb:SAR116_2008 4.3e-06 secretion protein HlyD; Psort location: Cytoplasmic, score: 8.96.
 
   0.918
EHG99259.1
Efflux ABC transporter, permease protein; KEGG: hde:HDEF_0539 5.0e-06 macrolide transporter ATP-binding/permease protein; K05685 macrolide transport system ATP-binding/permease protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
  0.901
EHH00698.1
ABC-2 type transporter; KEGG: har:HEAR2591 8.7e-36 rbbA; ribosome-associated ATPase K13926; Psort location: CytoplasmicMembrane, score: 10.00.
 
      0.899
EHH00699.1
ABC-2 type transporter; KEGG: bbt:BBta_3660 1.3e-34 ABC transporter permease ATP-binding protein K13926; Psort location: CytoplasmicMembrane, score: 10.00.
 
      0.889
EHH01772.1
Efflux ABC transporter, permease protein; KEGG: rsd:TGRD_043 4.9e-12 ABC-type macrolide exporter ATP-binding/permease component; K05685 macrolide transport system ATP-binding/permease protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
  0.869
EHH01771.1
Efflux ABC transporter, permease protein; KEGG: cju:C8J_0569 7.6e-11 macrolide ABC transporter ATPase/inner membrane protein; K05685 macrolide transport system ATP-binding/permease protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
  0.838
Your Current Organism:
Paraprevotella clara
NCBI taxonomy Id: 762968
Other names: P. clara YIT 11840, Paraprevotella clara YIT 11840, Paraprevotella clara str. YIT 11840, Paraprevotella clara strain YIT 11840
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