STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHG99769.1KEGG: pen:PSEEN3665 0.00060 efflux ABC transporter, ATP-binding/permease protein K05685; Psort location: CytoplasmicMembrane, score: 10.00. (824 aa)    
Predicted Functional Partners:
EHG99768.1
KEGG: bfr:BF2156 1.4e-76 ABC transporter ATP-binding protein; K09810 lipoprotein-releasing system ATP-binding protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.999
EHG99258.1
KEGG: bfr:BF2156 1.1e-81 ABC transporter ATP-binding protein; K09810 lipoprotein-releasing system ATP-binding protein; Psort location: CytoplasmicMembrane, score: 7.88.
 
 0.997
EHH01773.1
KEGG: bfr:BF2156 3.8e-58 ABC transporter ATP-binding protein; K09810 lipoprotein-releasing system ATP-binding protein; Psort location: CytoplasmicMembrane, score: 7.88.
 
 0.994
lolD
Lipoprotein releasing system, ATP-binding protein; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. Belongs to the ABC transporter superfamily. Lipoprotein translocase (TC 3.A.1.125) family.
  
 0.992
EHH00672.1
ABC transporter, ATP-binding protein.
  
 0.992
EHG99045.1
ABC transporter, ATP-binding protein.
  
 0.992
EHG99772.1
Efflux transporter, RND family, MFP subunit; KEGG: apb:SAR116_2008 4.3e-06 secretion protein HlyD; Psort location: Cytoplasmic, score: 8.96.
 
 
 0.965
EHG99257.1
Efflux transporter, RND family, MFP subunit; KEGG: rcp:RCAP_rcc02894 9.1e-07 mdtE; multidrug resistance protein MdtE K03585; Psort location: Cytoplasmic, score: 8.96.
 
 
 0.919
EHH01769.1
Efflux transporter, RND family, MFP subunit; KEGG: apb:SAR116_2008 2.0e-07 secretion protein HlyD.
 
 
 0.893
EHG99771.1
KEGG: pen:PSEEN3665 0.00013 efflux ABC transporter, ATP-binding/permease protein K05685; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
0.880
Your Current Organism:
Paraprevotella clara
NCBI taxonomy Id: 762968
Other names: P. clara YIT 11840, Paraprevotella clara YIT 11840, Paraprevotella clara str. YIT 11840, Paraprevotella clara strain YIT 11840
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