STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHG99774.1Response regulator/sigma54 interaction protein; Putative fused DNA-binding response regulator in two-component regulatory system with ZraS: response regulator/sigma54 interaction protein; KEGG: eci:UTI89_C2502 1.9e-77 atoC; acetoacetate metabolism regulatory protein AtoC K07714; Psort location: Cytoplasmic, score: 9.97. (455 aa)    
Predicted Functional Partners:
EHG99775.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: ddd:Dda3937_00962 3.3e-34 sensor histidine kinase; Psort location: CytoplasmicMembrane, score: 9.99.
 
 
 0.956
EHH00322.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: gfo:GFO_3052 3.6e-85 two-component system sensor histidine kinase/response regulator hybrid K00936; Psort location: CytoplasmicMembrane, score: 7.88.
  
 0.853
EHH00790.1
KEGG: reh:H16_A0387 7.6e-60 rpoN; RNA polymerase factor sigma-54 K03092; Psort location: Cytoplasmic, score: 9.97.
 
 
 0.833
EHG98398.1
KEGG: gfo:GFO_0006 2.5e-21 sugar-binding sensor histidine kinase/response regulator hybrid; Psort location: CytoplasmicMembrane, score: 7.88.
  
 0.826
EHG99253.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: glo:Glov_1376 8.1e-26 multi-sensor signal transduction histidine kinase; K13598 two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.786
EHH00630.1
KEGG: bvu:BVU_3787 0. pyruvate-flavodoxin oxidoreductase; K03737 putative pyruvate-flavodoxin oxidoreductase; Psort location: Cytoplasmic, score: 8.96.
    
 0.775
EHH00773.1
Transcriptional regulator, AraC family; KEGG: dfe:Dfer_1574 6.6e-61 histidine kinase; Psort location: Cytoplasmic, score: 9.26.
 
 0.750
EHH01210.1
Response regulator receiver domain protein; KEGG: dfe:Dfer_1574 8.6e-155 histidine kinase; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.744
EHG99771.1
KEGG: pen:PSEEN3665 0.00013 efflux ABC transporter, ATP-binding/permease protein K05685; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.733
EHG99772.1
Efflux transporter, RND family, MFP subunit; KEGG: apb:SAR116_2008 4.3e-06 secretion protein HlyD; Psort location: Cytoplasmic, score: 8.96.
 
     0.710
Your Current Organism:
Paraprevotella clara
NCBI taxonomy Id: 762968
Other names: P. clara YIT 11840, Paraprevotella clara YIT 11840, Paraprevotella clara str. YIT 11840, Paraprevotella clara strain YIT 11840
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.