STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHG99794.1Hypothetical protein. (103 aa)    
Predicted Functional Partners:
EHG99795.1
DNA binding domain, excisionase family.
 
     0.917
EHH00630.1
KEGG: bvu:BVU_3787 0. pyruvate-flavodoxin oxidoreductase; K03737 putative pyruvate-flavodoxin oxidoreductase; Psort location: Cytoplasmic, score: 8.96.
     
 0.739
EHH00168.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.739
EHH00555.1
KEGG: bvu:BVU_4007 0. glutamate synthase, large subunit; K00265 glutamate synthase (NADPH/NADH) large chain.
    
  0.722
EHG99701.1
Hypothetical protein.
  
     0.659
EHH01413.1
RteC protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.623
EHG99704.1
RteC protein; KEGG: smf:Smon_0593 0.00063 putative CheA signal transduction histidine kinase; K03407 two-component system, chemotaxis family, sensor kinase CheA; Psort location: Cytoplasmic, score: 8.96.
  
     0.615
EHH02043.1
RteC protein.
  
     0.604
EHG99802.1
Integrase; Psort location: Cytoplasmic, score: 8.96; Belongs to the 'phage' integrase family.
  
     0.554
EHG99793.1
Hypothetical protein.
       0.553
Your Current Organism:
Paraprevotella clara
NCBI taxonomy Id: 762968
Other names: P. clara YIT 11840, Paraprevotella clara YIT 11840, Paraprevotella clara str. YIT 11840, Paraprevotella clara strain YIT 11840
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.