STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHG99805.1Hypothetical protein; KEGG: hse:Hsero_0876 0.0025 site-specific phage recombinase/integrase. (55 aa)    
Predicted Functional Partners:
EHG99782.1
Site-specific recombinase, phage integrase family; KEGG: apb:SAR116_1514 0.0014 probable site-specific integrase/recombinase; Psort location: Cytoplasmic, score: 8.96; Belongs to the 'phage' integrase family.
  
     0.775
EHG99781.1
DNA binding domain, excisionase family.
  
     0.772
EHG98653.1
DNA binding domain, excisionase family; Psort location: Cytoplasmic, score: 8.96.
  
     0.761
EHG99803.1
KEGG: apb:SAR116_1837 4.4e-05 phage integrase family protein K03733; Psort location: Cytoplasmic, score: 8.96; Belongs to the 'phage' integrase family.
 
     0.595
EHG99802.1
Integrase; Psort location: Cytoplasmic, score: 8.96; Belongs to the 'phage' integrase family.
 
     0.587
EHG99795.1
DNA binding domain, excisionase family.
  
     0.586
EHG99801.1
Hypothetical protein; KEGG: apb:SAR116_1016 0.00046 phage integrase family protein.
 
     0.561
EHG99804.1
Hypothetical protein.
       0.551
EHH00240.1
Hypothetical protein; KEGG: aae:aq_1410 0.0030 trpB2; tryptophan synthase subunit beta K06001.
  
     0.520
EHH01014.1
Site-specific recombinase, phage integrase family; Belongs to the 'phage' integrase family.
  
     0.512
Your Current Organism:
Paraprevotella clara
NCBI taxonomy Id: 762968
Other names: P. clara YIT 11840, Paraprevotella clara YIT 11840, Paraprevotella clara str. YIT 11840, Paraprevotella clara strain YIT 11840
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.