STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHG99585.1Hypothetical protein; KEGG: ehi:EHI_137900 0.00051 64.t00037; DNA-directed RNA polymerase I subunit 13; K03000 DNA-directed RNA polymerase I subunit A12; Psort location: CytoplasmicMembrane, score: 9.46. (308 aa)    
Predicted Functional Partners:
EHG99586.1
LemA family protein; Psort location: Periplasmic, score: 9.83.
 
    0.925
EHG99584.1
Hypothetical protein; KEGG: sds:SDEG_0334 1.4e-44 alpha/beta hydrolase K06889; Psort location: Cytoplasmic, score: 8.96.
       0.767
EHG99583.1
KEGG: pmz:HMPREF0659_A6714 2.8e-92 putative shikimate 5-dehydrogenase; K00014 shikimate dehydrogenase; Psort location: Cytoplasmic, score: 9.97.
       0.761
EHH01873.1
Hypothetical protein.
    
   0.760
EHG98125.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.82.
    
   0.760
menG
Ubiquinone/menaquinone biosynthesis methyltransferase; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2).
       0.736
purC
KEGG: pru:PRU_0723 2.2e-140 purC; phosphoribosylaminoimidazolesuccinocarboxamide synthase K01923; Psort location: Cytoplasmic, score: 8.96; Belongs to the SAICAR synthetase family.
       0.725
EHG99587.1
Hypothetical protein; KEGG: bvu:BVU_0092 1.4e-184 putative phosphoribosylformylglycinamidine cyclo-ligase; K01933 phosphoribosylformylglycinamidine cyclo-ligase; Psort location: Cytoplasmic, score: 9.97.
       0.631
EHG99580.1
PhoH-like protein; KEGG: apb:SAR116_1589 1.5e-63 PhoH family protein K06217; Psort location: Cytoplasmic, score: 9.97.
       0.621
EHG98397.1
LemA family protein.
 
    0.558
Your Current Organism:
Paraprevotella clara
NCBI taxonomy Id: 762968
Other names: P. clara YIT 11840, Paraprevotella clara YIT 11840, Paraprevotella clara str. YIT 11840, Paraprevotella clara strain YIT 11840
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.