STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHG99519.1Hypothetical protein; KEGG: pjd:Pjdr2_4274 5.5e-21 alpha-L-fucosidase. (810 aa)    
Predicted Functional Partners:
EHG99203.1
Trehalose-phosphatase; KEGG: bvu:BVU_3259 8.8e-288 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; K00697 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Psort location: Cytoplasmic, score: 9.97.
  
 0.864
EHG98947.1
Hypothetical protein.
  
  
  0.849
EHG99916.1
F5/8 type C domain protein; KEGG: aau:AAur_0604 3.8e-42 hypothetical protein; K01206 alpha-L-fucosidase; Psort location: Cytoplasmic, score: 8.96.
  
  
  0.831
EHG98847.1
F5/8 type C domain protein; KEGG: cpi:Cpin_6474 2.1e-160 coagulation factor 5/8 type domain protein; K01206 alpha-L-fucosidase; Psort location: Cytoplasmic, score: 8.96.
  
  
  0.788
EHH01500.1
Alpha-1,3-galactosidase A domain protein.
  
  
  0.696
EHH00580.1
Alpha-L-fucosidase; KEGG: pru:PRU_2780 4.0e-141 family 29 glycosyl hydrolase; K01206 alpha-L-fucosidase.
  
  
  0.630
EHG98817.1
Alpha-L-fucosidase; KEGG: bth:BT_3665 4.9e-175 alpha-L-fucosidase precursor; K01206 alpha-L-fucosidase; Psort location: Periplasmic, score: 9.84.
  
  
  0.614
EHH00750.1
Alpha amylase, catalytic domain protein; KEGG: pha:PSHAa1355 1.1e-129 glycosidase K01234; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.582
EHG98553.1
1,4-alpha-glucan-branching enzyme; KEGG: bvu:BVU_3322 0. 1,4-alpha-glucan branching protein; K00700 1,4-alpha-glucan branching enzyme; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.562
EHH01212.1
Hypothetical protein; KEGG: gym:GYMC10_4404 1.5e-141 alpha-L-fucosidase; Psort location: Cytoplasmic, score: 8.96.
  
  
 
0.551
Your Current Organism:
Paraprevotella clara
NCBI taxonomy Id: 762968
Other names: P. clara YIT 11840, Paraprevotella clara YIT 11840, Paraprevotella clara str. YIT 11840, Paraprevotella clara strain YIT 11840
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.