STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHG99435.1Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase; Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6-dimethylbenzimidazole (DMB). (359 aa)    
Predicted Functional Partners:
EHG99436.1
Putative adenosylcobalamin biosynthesis protein CobU; KEGG: pru:PRU_1093 2.1e-55 cobP; cobinamide kinase/cobinamide phosphate guanylyltransferase K02231; Psort location: Cytoplasmic, score: 9.26.
 
 0.998
EHG99433.1
Alpha-ribazole phosphatase; KEGG: fps:FP1458 3.8e-26 gpmA; phosphoglycerate mutase; Psort location: Cytoplasmic, score: 8.96.
 
 
 0.984
cobS
adenosylcobinamide-GDP ribazoletransferase; Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'- phosphate; Belongs to the CobS family.
 
 
 0.984
cobQ
Cobyric acid synthase CobQ; Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily.
 
  
 0.876
EHH00959.1
Putative threonine-phosphate decarboxylase.
  
 0.845
cobD
Cobalamin biosynthesis protein CobD; Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group.
 
  
 0.840
EHH00340.1
KEGG: pru:PRU_1341 2.1e-32 phosphoglycerate mutase family protein; K01834 phosphoglycerate mutase; Psort location: Cytoplasmic, score: 8.96.
  
 
 0.619
EHG99432.1
Transcriptional regulator, AraC family; KEGG: dfe:Dfer_1574 2.2e-39 histidine kinase; Psort location: Cytoplasmic, score: 8.96.
  
    0.576
EHG99438.1
Prephenate dehydrogenase; KEGG: bvu:BVU_2060 1.5e-100 chorismate mutase/prephenate dehydratase; K04092 chorismate mutase K04517; Psort location: Cytoplasmic, score: 8.96.
       0.497
EHG99439.1
Putative 3-deoxy-7-phosphoheptulonate synthase; KEGG: bvu:BVU_2061 1.4e-147 putative phospho-2-dehydro-3-deoxyheptonate aldolase; K04516 chorismate mutase; Psort location: Cytoplasmic, score: 8.96.
  
    0.462
Your Current Organism:
Paraprevotella clara
NCBI taxonomy Id: 762968
Other names: P. clara YIT 11840, Paraprevotella clara YIT 11840, Paraprevotella clara str. YIT 11840, Paraprevotella clara strain YIT 11840
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