STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHG99441.1KEGG: bvu:BVU_2063 2.1e-112 prephenate dehydratase; K04518 prephenate dehydratase; Psort location: Cytoplasmic, score: 9.97. (312 aa)    
Predicted Functional Partners:
EHG99439.1
Putative 3-deoxy-7-phosphoheptulonate synthase; KEGG: bvu:BVU_2061 1.4e-147 putative phospho-2-dehydro-3-deoxyheptonate aldolase; K04516 chorismate mutase; Psort location: Cytoplasmic, score: 8.96.
 
 
 0.997
EHH01599.1
Aspartate transaminase.
 
 
 0.985
EHG99438.1
Prephenate dehydrogenase; KEGG: bvu:BVU_2060 1.5e-100 chorismate mutase/prephenate dehydratase; K04092 chorismate mutase K04517; Psort location: Cytoplasmic, score: 8.96.
 
 
 0.977
EHG99342.1
Aminotransferase, class I/II; KEGG: bvu:BVU_3865 1.3e-197 aspartate aminotransferase K00811; Psort location: Cytoplasmic, score: 9.97.
 
 
 0.934
EHH00853.1
KEGG: bth:BT_3216 1.3e-39 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine; K00950 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase; Psort location: Cytoplasmic, score: 9.97.
      0.895
hisC
KEGG: bvu:BVU_2363 1.7e-126 histidinol-phosphate aminotransferase; K00817 histidinol-phosphate aminotransferase; Psort location: Cytoplasmic, score: 9.97; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.
 
 
 0.893
EHG99440.1
Putative LL-diaminopimelate aminotransferase; KEGG: bth:BT_3935 5.8e-156 aminotransferase; K00837; Psort location: Cytoplasmic, score: 9.97.
 
 0.884
EHG98093.1
Hypothetical protein; KEGG: coc:Coch_0228 3.6e-19 DAHP synthetase I/KdsA; K04516 chorismate mutase.
  
 
 0.848
kdsB
3-deoxy-D-manno-octulosonate cytidylyltransferase; Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria.
      0.817
aroC
Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system.
 
  
 0.752
Your Current Organism:
Paraprevotella clara
NCBI taxonomy Id: 762968
Other names: P. clara YIT 11840, Paraprevotella clara YIT 11840, Paraprevotella clara str. YIT 11840, Paraprevotella clara strain YIT 11840
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.