STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHG99161.1KEGG: bvu:BVU_3551 1.6e-130 ribose-phosphate pyrophosphokinase K00948; Psort location: Cytoplasmic, score: 9.97. (305 aa)    
Predicted Functional Partners:
EHG98185.1
E3 binding domain protein; KEGG: coc:Coch_0061 4.2e-91 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase K00627; Psort location: Cytoplasmic, score: 9.26.
   
 0.986
EHG99733.1
Putative dihydrolipoyl dehydrogenase; KEGG: eci:UTI89_C0327 2.9e-115 ykgC; pyridine nucleotide-disulfide oxidoreductase; Psort location: Cytoplasmic, score: 9.97.
   
 0.974
EHG98203.1
Hypothetical protein; KEGG: coc:Coch_1738 2.5e-59 sucA; 2-oxoglutarate dehydrogenase E1 component K00164; Psort location: Cytoplasmic, score: 9.97.
   
 0.957
EHG99279.1
Transketolase, thiamine diphosphate binding domain protein; KEGG: pru:PRU_0393 3.6e-291 putative transketolase; K00615 transketolase; Psort location: CytoplasmicMembrane, score: 8.46; Belongs to the transketolase family.
   
 
 0.916
EHG98996.1
Phosphoglucomutase; KEGG: bth:BT_1548 4.9e-246 phosphoglucomutase phosphomannomutase; K01840 phosphomannomutase; Psort location: Cytoplasmic, score: 9.97.
  
 0.896
pyrE
Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP).
  
 
 0.889
EHG99280.1
KEGG: pru:PRU_0392 2.6e-57 rpiB; ribose-5-phosphate isomerase B K01808; Psort location: Cytoplasmic, score: 8.96.
    
 0.888
EHG98975.1
Class II glutamine amidotransferase.
  
 0.883
EHG98478.1
Hydrolase, NUDIX family; KEGG: bfr:BF4292 8.0e-49 putative NUDIX/MutT family protein; K01515 ADP-ribose pyrophosphatase; Psort location: Cytoplasmic, score: 8.96.
  
 
 0.875
lysS
lysine--tRNA ligase; KEGG: bth:BT_2122 2.3e-264 lysS; lysyl-tRNA synthetase K04567; Psort location: Cytoplasmic, score: 9.97; Belongs to the class-II aminoacyl-tRNA synthetase family.
  
 
 0.859
Your Current Organism:
Paraprevotella clara
NCBI taxonomy Id: 762968
Other names: P. clara YIT 11840, Paraprevotella clara YIT 11840, Paraprevotella clara str. YIT 11840, Paraprevotella clara strain YIT 11840
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