STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHG99211.1Sigma-54 interaction domain protein; KEGG: eci:UTI89_C2502 6.0e-83 atoC; acetoacetate metabolism regulatory protein AtoC K07714; Psort location: Cytoplasmic, score: 9.97. (449 aa)    
Predicted Functional Partners:
EHH00322.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: gfo:GFO_3052 3.6e-85 two-component system sensor histidine kinase/response regulator hybrid K00936; Psort location: CytoplasmicMembrane, score: 7.88.
  
 0.853
EHH00790.1
KEGG: reh:H16_A0387 7.6e-60 rpoN; RNA polymerase factor sigma-54 K03092; Psort location: Cytoplasmic, score: 9.97.
 
 
 0.833
EHG98398.1
KEGG: gfo:GFO_0006 2.5e-21 sugar-binding sensor histidine kinase/response regulator hybrid; Psort location: CytoplasmicMembrane, score: 7.88.
  
 0.826
EHH00630.1
KEGG: bvu:BVU_3787 0. pyruvate-flavodoxin oxidoreductase; K03737 putative pyruvate-flavodoxin oxidoreductase; Psort location: Cytoplasmic, score: 8.96.
    
 0.775
EHH01210.1
Response regulator receiver domain protein; KEGG: dfe:Dfer_1574 8.6e-155 histidine kinase; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.744
EHH01747.1
Response regulator receiver domain protein; KEGG: dfe:Dfer_1574 2.3e-122 histidine kinase; Psort location: CytoplasmicMembrane, score: 10.00.
  
 0.708
EHH01639.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: gfo:GFO_0036 5.2e-132 two-component system sensor histidine kinase/response regulator hybrid K00936.
  
 0.708
EHH00773.1
Transcriptional regulator, AraC family; KEGG: dfe:Dfer_1574 6.6e-61 histidine kinase; Psort location: Cytoplasmic, score: 9.26.
  
 0.708
EHH00599.1
Two component regulator propeller; KEGG: dfe:Dfer_0792 7.9e-33 histidine kinase; Psort location: CytoplasmicMembrane, score: 9.46.
  
 0.708
EHH00631.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: dfe:Dfer_1574 1.3e-135 histidine kinase; Psort location: CytoplasmicMembrane, score: 10.00.
  
 0.708
Your Current Organism:
Paraprevotella clara
NCBI taxonomy Id: 762968
Other names: P. clara YIT 11840, Paraprevotella clara YIT 11840, Paraprevotella clara str. YIT 11840, Paraprevotella clara strain YIT 11840
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.