STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHG99234.1Tetratricopeptide repeat protein. (250 aa)    
Predicted Functional Partners:
EHG99235.1
BatD family protein.
  
 0.996
EHG99237.1
Von Willebrand factor type A domain protein; KEGG: pmm:PMM0288 0.0065 chlD; protoporphyrin IX magnesium chelatase subunit ChlD; K03404 magnesium chelatase subunit D; Psort location: CytoplasmicMembrane, score: 9.82.
 
   
 0.931
EHG99239.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.928
EHG99236.1
Tetratricopeptide repeat protein; KEGG: api:100165765 1.0e-07 ACYPI006692; similar to AGAP006254-PA; K09667 polypeptide N-acetylglucosaminyltransferase.
 
     0.920
EHG99240.1
Von Willebrand factor type A domain protein; KEGG: mka:MK0192 0.0024 chlI, chlD; Mg-chelatase subunit ChlI/ChlD; K03405 magnesium chelatase subunit I; Psort location: Cytoplasmic, score: 9.97.
 
     0.896
EHG99238.1
Von Willebrand factor type A domain protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.894
EHG99233.1
PAP2 family protein; KEGG: gfo:GFO_0516 9.3e-23 PAP2 superfamily membrane protein K01112; Psort location: CytoplasmicMembrane, score: 10.00.
       0.791
EHH01084.1
OmpA family protein.
  
  
 0.772
EHG99241.1
ATPase family protein; KEGG: bvu:BVU_3285 1.9e-150 magnesium chelatase, subunit I; K03924 MoxR-like ATPase; Psort location: Cytoplasmic, score: 9.97.
       0.674
EHH00047.1
KEGG: gfo:GFO_2227 5.0e-24 LysM domain-containing proteins K01423; Psort location: Cytoplasmic, score: 8.96.
    
  0.670
Your Current Organism:
Paraprevotella clara
NCBI taxonomy Id: 762968
Other names: P. clara YIT 11840, Paraprevotella clara YIT 11840, Paraprevotella clara str. YIT 11840, Paraprevotella clara strain YIT 11840
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