STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHG99261.1Hypothetical protein. (51 aa)    
Predicted Functional Partners:
EHG99260.1
Hypothetical protein.
       0.773
EHG99259.1
Efflux ABC transporter, permease protein; KEGG: hde:HDEF_0539 5.0e-06 macrolide transporter ATP-binding/permease protein; K05685 macrolide transport system ATP-binding/permease protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.757
EHG99258.1
KEGG: bfr:BF2156 1.1e-81 ABC transporter ATP-binding protein; K09810 lipoprotein-releasing system ATP-binding protein; Psort location: CytoplasmicMembrane, score: 7.88.
       0.703
EHG99257.1
Efflux transporter, RND family, MFP subunit; KEGG: rcp:RCAP_rcc02894 9.1e-07 mdtE; multidrug resistance protein MdtE K03585; Psort location: Cytoplasmic, score: 8.96.
       0.625
EHG99256.1
Outer membrane efflux protein; KEGG: cco:CCC13826_0688 0.00010 L-seryl-tRNA(sec) selenium transferase; Psort location: OuterMembrane, score: 10.00.
       0.552
Your Current Organism:
Paraprevotella clara
NCBI taxonomy Id: 762968
Other names: P. clara YIT 11840, Paraprevotella clara YIT 11840, Paraprevotella clara str. YIT 11840, Paraprevotella clara strain YIT 11840
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.