STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHG99299.1ACT domain protein; KEGG: sat:SYN_01196 3.8e-17 acetolactate synthase small subunit. (145 aa)    
Predicted Functional Partners:
EHG99300.1
Phenylacetate-coenzyme A ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA).
 
   0.931
EHG98953.1
Phenylacetate-coenzyme A ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA).
 
   0.738
EHG99439.1
Putative 3-deoxy-7-phosphoheptulonate synthase; KEGG: bvu:BVU_2061 1.4e-147 putative phospho-2-dehydro-3-deoxyheptonate aldolase; K04516 chorismate mutase; Psort location: Cytoplasmic, score: 8.96.
    
  0.683
EHG98093.1
Hypothetical protein; KEGG: coc:Coch_0228 3.6e-19 DAHP synthetase I/KdsA; K04516 chorismate mutase.
    
  0.683
EHG98950.1
Putative indolepyruvate ferredoxin oxidoreductase, alpha subunit; Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates.
 
    0.675
EHG98951.1
Putative indolepyruvate ferredoxin oxidoreductase, beta subunit.
 
    0.638
EHG99301.1
Hypothetical protein.
       0.620
EHH00969.1
Hypothetical homoserine kinase.
  
  
  0.571
EHH02082.1
KEGG: bfs:BF0481 2.2e-181 argG; putative argininosuccinate synthase K01940; Psort location: Cytoplasmic, score: 9.97.
   
 
  0.493
EHG99302.1
Hypothetical protein.
       0.446
Your Current Organism:
Paraprevotella clara
NCBI taxonomy Id: 762968
Other names: P. clara YIT 11840, Paraprevotella clara YIT 11840, Paraprevotella clara str. YIT 11840, Paraprevotella clara strain YIT 11840
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