STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHG98928.1Hypothetical protein. (579 aa)    
Predicted Functional Partners:
EHG98925.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.778
EHG98926.1
DoxX family protein; KEGG: pmz:HMPREF0659_A5471 5.4e-16 tpiA; triose-phosphate isomerase; Psort location: CytoplasmicMembrane, score: 10.00.
       0.773
EHG98927.1
Signal peptidase I; Belongs to the peptidase S26 family.
       0.773
EHG98929.1
Outer membrane efflux protein.
       0.757
EHG98930.1
Efflux transporter, RND family, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
       0.744
EHG98931.1
RND transporter, HAE1/HME family, permease protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
       0.692
EHG98932.1
Hypothetical protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
       0.692
EHG98924.1
Hypothetical protein; KEGG: eat:EAT1b_2563 0.0073 Peptidylamidoglycolate lyase.
       0.581
EHG98923.1
Hypothetical protein.
       0.559
Your Current Organism:
Paraprevotella clara
NCBI taxonomy Id: 762968
Other names: P. clara YIT 11840, Paraprevotella clara YIT 11840, Paraprevotella clara str. YIT 11840, Paraprevotella clara strain YIT 11840
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.