STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHG98956.1Glycosyl hydrolase family 2, sugar binding domain protein; Belongs to the glycosyl hydrolase 2 family. (981 aa)    
Predicted Functional Partners:
EHG98955.1
Glycosyl hydrolase, family 88.
 
  
  0.891
EHG98957.1
GDSL-like protein.
 
  
  0.861
EHH00380.1
Tetratricopeptide repeat protein; KEGG: dsh:Dshi_1167 0.00081 peptidase M48 Ste24p; Psort location: Cytoplasmic, score: 8.96.
 
  
  0.758
EHH00741.1
Hypothetical protein; KEGG: fsu:Fisuc_2943 2.1e-11 glucuronoarabinoxylan endo-1,4-beta-xylanase.
  
 
  0.680
EHG99604.1
Hypothetical protein.
  
     0.671
EHG99895.1
Glycosyl hydrolase, family 88; KEGG: rmr:Rmar_2469 2.8e-15 pectinesterase K01051; Psort location: Cytoplasmic, score: 9.26.
  
  
  0.664
EHG98958.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.82.
       0.664
EHG98592.1
KEGG: pru:PRU_0082 2.9e-273 putative beta-galactosidase; K12308 beta-galactosidase.
  
 
  0.657
EHH00387.1
Transcriptional regulator, AraC family; KEGG: bli:BL05281 1.8e-09 adaA; methylphosphotriester-DNA alkyltransferase/transcriptional regulator; K13530 AraC family transcriptional regulator, regulatory protein of adaptative response / methylphosphotriester-DNA alkyltransferase methyltransferase; Psort location: Cytoplasmic, score: 9.26.
 
  
  0.633
EHH00581.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.583
Your Current Organism:
Paraprevotella clara
NCBI taxonomy Id: 762968
Other names: P. clara YIT 11840, Paraprevotella clara YIT 11840, Paraprevotella clara str. YIT 11840, Paraprevotella clara strain YIT 11840
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