STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHG98963.1Putative hemolysin. (388 aa)    
Predicted Functional Partners:
EHG98964.1
Hypothetical protein; KEGG: cco:CCC13826_2309 1.3e-46 hydrogenase-4 component C; Psort location: Cytoplasmic, score: 8.96.
     0.980
EHH01494.1
Cysteine synthase A; Belongs to the cysteine synthase/cystathionine beta- synthase family.
    
 0.875
EHH01599.1
Aspartate transaminase.
  
  
0.866
EHH00970.1
Homoserine dehydrogenase.
    
 0.859
EHH00160.1
5-methyltetrahydrofolate--homocysteine methyltransferase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
     
 0.859
EHG99342.1
Aminotransferase, class I/II; KEGG: bvu:BVU_3865 1.3e-197 aspartate aminotransferase K00811; Psort location: Cytoplasmic, score: 9.97.
     
0.850
EHH01109.1
Xaa-His dipeptidase.
    
  0.848
EHG98296.1
KEGG: bvu:BVU_0770 6.0e-202 O-acetylhomoserine (thiol)-lyase; K01740 O-acetylhomoserine (thiol)-lyase; Psort location: Cytoplasmic, score: 9.97.
   
 0.741
EHH01495.1
O-acetylhomoserine aminocarboxypropyltransferase.
   
 0.740
EHH00729.1
KEGG: bvu:BVU_3892 1.2e-148 threonine dehydratase; K01754 threonine dehydratase; Psort location: Cytoplasmic, score: 9.97.
    
  0.720
Your Current Organism:
Paraprevotella clara
NCBI taxonomy Id: 762968
Other names: P. clara YIT 11840, Paraprevotella clara YIT 11840, Paraprevotella clara str. YIT 11840, Paraprevotella clara strain YIT 11840
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.